Basic Statistics
Measure | Value |
---|---|
Filename | ERR1042606.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 7099766 |
Sequences flagged as poor quality | 0 |
Sequence length | 43 |
%GC | 49 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 3075 | 0.0 | 21.718699 | 1 |
TATACTG | 1425 | 0.0 | 15.319299 | 5 |
GTATCAA | 4525 | 0.0 | 14.513812 | 2 |
CTAACGC | 240 | 5.456968E-12 | 13.875001 | 3 |
TTAGACT | 790 | 0.0 | 13.582278 | 4 |
TACACTG | 2355 | 0.0 | 13.511678 | 5 |
TTATACC | 1110 | 0.0 | 13.333333 | 4 |
CGTATTA | 325 | 0.0 | 13.092307 | 15 |
CTAGTAC | 580 | 0.0 | 13.077586 | 3 |
ACGCGTG | 85 | 0.009411001 | 13.058824 | 19 |
CTAGACT | 870 | 0.0 | 12.971265 | 4 |
TAGACTG | 1045 | 0.0 | 12.923445 | 5 |
ATACGCG | 145 | 1.3742327E-5 | 12.75862 | 30 |
TAATACT | 1525 | 0.0 | 12.737705 | 4 |
CTACACT | 1835 | 0.0 | 12.702997 | 4 |
GTACTAG | 615 | 0.0 | 12.634146 | 1 |
TATACCG | 340 | 0.0 | 12.514706 | 5 |
GTATAAG | 1100 | 0.0 | 12.445455 | 1 |
TAGACAG | 1325 | 0.0 | 12.4264145 | 5 |
GTGTAAG | 1545 | 0.0 | 12.333334 | 1 |