Basic Statistics
Measure | Value |
---|---|
Filename | ERR1042591.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 6432709 |
Sequences flagged as poor quality | 0 |
Sequence length | 43 |
%GC | 52 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 2940 | 0.0 | 18.5 | 1 |
TTATACT | 705 | 0.0 | 14.957447 | 4 |
GTATACG | 325 | 0.0 | 14.8 | 1 |
CTAGTAC | 405 | 0.0 | 14.617284 | 3 |
CGCGCTA | 875 | 0.0 | 14.377143 | 24 |
TAATACC | 605 | 0.0 | 14.066115 | 4 |
TTAATAC | 500 | 0.0 | 13.690001 | 3 |
GTATTAA | 545 | 0.0 | 13.577982 | 1 |
GTATCAA | 3965 | 0.0 | 13.437579 | 2 |
TAAGACT | 760 | 0.0 | 13.388158 | 4 |
CGGGTAA | 475 | 0.0 | 13.2421055 | 24 |
ATTGACG | 755 | 0.0 | 13.231787 | 32 |
TATACTG | 825 | 0.0 | 13.230304 | 5 |
CGTTAAC | 140 | 9.574338E-6 | 13.214285 | 1 |
TAGACAG | 945 | 0.0 | 13.116403 | 5 |
TCTATAC | 510 | 0.0 | 13.058824 | 3 |
TTAGACT | 470 | 0.0 | 12.989361 | 4 |
TAACGCC | 755 | 0.0 | 12.986754 | 4 |
GTATTAG | 900 | 0.0 | 12.95 | 1 |
GTGTAAG | 1115 | 0.0 | 12.941704 | 1 |