Basic Statistics
Measure | Value |
---|---|
Filename | ERR1042571.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 6815550 |
Sequences flagged as poor quality | 0 |
Sequence length | 43 |
%GC | 49 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT | 14618 | 0.21448012266068037 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT | 11784 | 0.1728987389132205 | No Hit |
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT | 9602 | 0.14088371444710993 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 4225 | 0.0 | 23.951477 | 1 |
GTATCAA | 6450 | 0.0 | 15.459688 | 2 |
TATACTG | 1215 | 0.0 | 14.617285 | 5 |
CGCGTAT | 150 | 1.3080898E-6 | 13.566667 | 12 |
TAGACTG | 955 | 0.0 | 13.560209 | 5 |
GTACCGT | 180 | 5.171387E-8 | 13.361111 | 6 |
CGAACGA | 375 | 0.0 | 13.32 | 16 |
TCTATAC | 935 | 0.0 | 13.256685 | 3 |
CTATACT | 1345 | 0.0 | 12.516729 | 4 |
CTAGTAC | 495 | 0.0 | 12.333334 | 3 |
GACGGAC | 570 | 0.0 | 12.333334 | 7 |
GTAAACG | 450 | 0.0 | 12.333333 | 27 |
TTAGACT | 650 | 0.0 | 12.238462 | 4 |
TATACCG | 290 | 1.2732926E-11 | 12.120689 | 5 |
CTACACT | 1880 | 0.0 | 12.103723 | 4 |
GTACTAG | 490 | 0.0 | 12.081634 | 1 |
ATCAACG | 8235 | 0.0 | 12.063753 | 4 |
TCAACGC | 8255 | 0.0 | 12.056934 | 5 |
GTATTAG | 1275 | 0.0 | 12.043138 | 1 |
TAGACCG | 170 | 5.3187596E-6 | 11.970589 | 5 |