Basic Statistics
Measure | Value |
---|---|
Filename | ERR1042555.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 10075622 |
Sequences flagged as poor quality | 0 |
Sequence length | 43 |
%GC | 49 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT | 15643 | 0.15525592365414265 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT | 14110 | 0.14004098208527474 | No Hit |
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT | 12076 | 0.1198536427825498 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 6485 | 0.0 | 25.703161 | 1 |
GTATCAA | 10420 | 0.0 | 15.836853 | 2 |
TATACTG | 2340 | 0.0 | 14.467949 | 5 |
TCGTTTA | 1190 | 0.0 | 13.836134 | 30 |
TAACGCC | 1295 | 0.0 | 13.571428 | 4 |
GACGGAC | 1315 | 0.0 | 13.505703 | 7 |
TCTAGCG | 865 | 0.0 | 13.4739895 | 28 |
CGAACGA | 795 | 0.0 | 13.264151 | 16 |
CTAGCGG | 865 | 0.0 | 13.260117 | 29 |
ACGAACG | 815 | 0.0 | 13.165646 | 15 |
ACGGACC | 1465 | 0.0 | 12.880546 | 8 |
ATAACGC | 1410 | 0.0 | 12.858155 | 3 |
TAATACT | 1890 | 0.0 | 12.626985 | 4 |
CCGGTCG | 1290 | 0.0 | 12.620155 | 20 |
GCGTTAT | 1075 | 0.0 | 12.562791 | 1 |
TAACGAA | 875 | 0.0 | 12.474286 | 13 |
TAGACAG | 1810 | 0.0 | 12.265193 | 5 |
GTATAGA | 1665 | 0.0 | 12.222222 | 1 |
GTAAACG | 1085 | 0.0 | 11.935484 | 27 |
CGCATCG | 1405 | 0.0 | 11.8505335 | 13 |