Basic Statistics
Measure | Value |
---|---|
Filename | ERR1042453.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 13054767 |
Sequences flagged as poor quality | 0 |
Sequence length | 43 |
%GC | 50 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC | 66042 | 0.505884172425291 | No Hit |
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG | 57327 | 0.4391269487996224 | No Hit |
GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA | 42872 | 0.3284011120229109 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT | 35987 | 0.27566175635306245 | No Hit |
CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG | 35268 | 0.2701541896534806 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT | 30633 | 0.23464991753587022 | No Hit |
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT | 26598 | 0.20374166769885665 | No Hit |
ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACAT | 22524 | 0.17253467641360432 | No Hit |
GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 22313 | 0.17091840857826113 | No Hit |
GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTAC | 21997 | 0.16849783684381345 | No Hit |
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT | 21567 | 0.1652040208760524 | No Hit |
TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAG | 20229 | 0.1549548911903215 | No Hit |
GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAAT | 18446 | 0.14129704497981466 | No Hit |
GCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCAC | 18119 | 0.1387922128368894 | No Hit |
GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATAC | 15860 | 0.1214881889504424 | No Hit |
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA | 15791 | 0.12095964638817376 | No Hit |
ACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 15534 | 0.11899101684465145 | No Hit |
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCC | 14238 | 0.10906360871856234 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGAACGG | 560 | 0.0 | 21.803572 | 26 |
AAGACGG | 5325 | 0.0 | 20.011269 | 5 |
GCGCGAA | 390 | 0.0 | 18.5 | 23 |
GACGGAC | 5675 | 0.0 | 18.15771 | 7 |
GAATCCC | 2025 | 0.0 | 17.997532 | 27 |
ACGGACC | 5785 | 0.0 | 17.972343 | 8 |
CAAGACG | 6150 | 0.0 | 17.868292 | 4 |
CGCAAGA | 5845 | 0.0 | 17.851154 | 2 |
CAACGCG | 665 | 0.0 | 17.526316 | 22 |
CGGACCA | 5895 | 0.0 | 17.448685 | 9 |
CCGAACG | 555 | 0.0 | 17.333334 | 25 |
AGACGGA | 6100 | 0.0 | 17.104918 | 6 |
ATGCGTT | 695 | 0.0 | 17.03597 | 29 |
TCTAGCG | 4090 | 0.0 | 16.91687 | 28 |
TTTAATT | 5045 | 0.0 | 16.794847 | 25 |
GCGAACG | 515 | 0.0 | 16.524273 | 25 |
CTAGCGG | 4205 | 0.0 | 16.410227 | 29 |
CGGTCCA | 4785 | 0.0 | 16.315569 | 10 |
GCGCAAG | 6595 | 0.0 | 16.073542 | 1 |
TGAATCC | 2660 | 0.0 | 15.926691 | 26 |