Basic Statistics
Measure | Value |
---|---|
Filename | ERR1042437.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 13455665 |
Sequences flagged as poor quality | 0 |
Sequence length | 43 |
%GC | 48 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC | 77215 | 0.5738475207282583 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT | 66116 | 0.49136181675153184 | No Hit |
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG | 61581 | 0.4576585401018828 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT | 59264 | 0.44043902698231563 | No Hit |
GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA | 50299 | 0.3738128141567139 | No Hit |
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT | 48443 | 0.36001936730737577 | No Hit |
CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG | 38675 | 0.2874254078115054 | No Hit |
ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACAT | 25582 | 0.1901206666485826 | No Hit |
GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 25140 | 0.18683580484502252 | No Hit |
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 25103 | 0.18656082772571997 | No Hit |
GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTAC | 24685 | 0.18345432945900483 | No Hit |
TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAG | 22252 | 0.16537272591135407 | No Hit |
GCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCAC | 19456 | 0.14459337386892437 | No Hit |
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA | 17663 | 0.13126813130380402 | No Hit |
ACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 16598 | 0.12335324935631202 | No Hit |
GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAG | 15418 | 0.11458370879477157 | No Hit |
TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGC | 13663 | 0.10154087516298899 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AAGACGG | 3515 | 0.0 | 16.68421 | 5 |
GACGGAC | 3380 | 0.0 | 16.146448 | 7 |
ACGGACC | 3440 | 0.0 | 16.026163 | 8 |
CAAGACG | 3920 | 0.0 | 15.762754 | 4 |
CGCAAGA | 3770 | 0.0 | 15.408488 | 2 |
CGAGCCG | 3615 | 0.0 | 15.19917 | 15 |
CGGACCA | 3750 | 0.0 | 14.898666 | 9 |
TATACTG | 2060 | 0.0 | 14.368932 | 5 |
TATAACG | 940 | 0.0 | 14.367021 | 2 |
GCGCAAG | 4050 | 0.0 | 14.343209 | 1 |
GTACTAG | 775 | 0.0 | 14.322581 | 1 |
AGACGGA | 3980 | 0.0 | 14.270101 | 6 |
TCTAGCG | 2045 | 0.0 | 13.841076 | 28 |
TACCGCA | 3940 | 0.0 | 13.616751 | 28 |
CTAGCGG | 2085 | 0.0 | 13.57554 | 29 |
ATAACGC | 3145 | 0.0 | 13.470589 | 3 |
ATACCGC | 4110 | 0.0 | 13.008515 | 27 |
GCGAAAG | 4175 | 0.0 | 12.938922 | 18 |
TACCGTC | 2225 | 0.0 | 12.88764 | 7 |
GTAAACG | 2960 | 0.0 | 12.8125 | 27 |