ERR1042415.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1042415.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6080429
Sequences flagged as poor quality	0
Sequence length	43
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	35847	0.5895472178032175	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	33131	0.5448793169034619	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	25315	0.4163357552567426	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC	17327	0.2849634458358119	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG	14412	0.2370227495461258	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14412	0.2370227495461258	No Hit
GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA	10292	0.16926437262897076	No Hit
CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG	7757	0.12757323537533288	No Hit
GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTAC	6623	0.10892323551512566	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTAACGG	455	0.0	15.857142	35
TAACGGC	460	0.0	15.684783	36
TATACTG	1055	0.0	13.853081	5
GTATTAG	1590	0.0	13.845911	1
ACGGACC	925	0.0	13.6	8
GACGGAC	940	0.0	13.186171	7
CGAACGA	635	0.0	13.110236	16
TAAACGC	720	0.0	13.104167	28
TAATACT	1295	0.0	13.0	4
GTAAACG	675	0.0	12.881481	27
GTATAGA	690	0.0	12.869565	1
CGAACGT	320	0.0	12.718751	4
CGAGCCG	1190	0.0	12.592437	15
TACGACG	670	0.0	12.425373	5
CGCAAGA	1170	0.0	12.333334	2
TTAATAC	800	0.0	12.025001	3
TCGAACG	340	0.0	11.970589	3
TATACCT	1300	0.0	11.953846	5
ATTAGAG	1100	0.0	11.940908	3
TCGTTAC	155	2.7241871E-5	11.935483	13