ERR1042408.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1042408.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	13749114
Sequences flagged as poor quality	0
Sequence length	43
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	126393	0.9192810533100534	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	124964	0.9088876563246185	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	94369	0.686364226814906	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	55774	0.405655229856993	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC	17913	0.1302847587124523	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	16177	0.11765849057619275	No Hit
GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA	15570	0.11324366064606053	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	15214	0.11065440289461562	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG	13752	0.10002099044345693	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TTAACGG	655	16.38168	35
TAACGGC	675	15.074074	36
CTAGCGG	1730	14.864162	29
AAGACGG	3120	14.764423	5
TCTAGCG	1725	14.692753	28
CGAGCCG	3055	14.533551	15
ACGGACC	3040	14.361842	8
GACGGAC	3030	14.287129	7
GTAAACG	2085	13.841726	27
CAAGACG	3665	13.780354	4
GTATTAG	3145	13.411765	1
CGAACGA	1975	13.301266	16
CGGACCA	3435	13.195052	9
TAATACT	2230	13.190582	4
TCGTTTA	2415	13.175983	30
CGAACGT	900	13.155555	4
TAAACGC	2275	12.92967	28
TCGAACG	990	12.89394	3
AGACGGA	3580	12.712291	6
CGCAAGA	3590	12.625348	2