Basic Statistics
Measure | Value |
---|---|
Filename | ERR1042307.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 9357458 |
Sequences flagged as poor quality | 0 |
Sequence length | 43 |
%GC | 51 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT | 11158 | 0.11924178553620012 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 5760 | 0.0 | 23.028646 | 1 |
TTAGACT | 1050 | 0.0 | 15.680952 | 4 |
GTATCAA | 9215 | 0.0 | 14.133478 | 2 |
TAGACTA | 950 | 0.0 | 13.826316 | 5 |
TATACTG | 1200 | 0.0 | 13.720833 | 5 |
CTAGTAC | 615 | 0.0 | 13.536585 | 3 |
ATAATAC | 1405 | 0.0 | 13.298933 | 3 |
ATTAGAC | 915 | 0.0 | 13.142077 | 3 |
TCGCTAA | 685 | 0.0 | 12.963504 | 14 |
TTAGCGA | 800 | 0.0 | 12.718749 | 27 |
TATTAGA | 1355 | 0.0 | 12.697417 | 2 |
GTATTAT | 1380 | 0.0 | 12.199276 | 1 |
TAATACT | 1605 | 0.0 | 11.872274 | 4 |
ATTAGAG | 1200 | 0.0 | 11.870832 | 3 |
ATACCGC | 1420 | 0.0 | 11.855634 | 27 |
TCGTTTA | 815 | 0.0 | 11.80368 | 30 |
GTATTAG | 2180 | 0.0 | 11.795872 | 1 |
CGATCGC | 770 | 0.0 | 11.772728 | 19 |
TAATACG | 990 | 0.0 | 11.772727 | 4 |
CGCGATA | 110 | 0.003748474 | 11.772727 | 14 |