ERR1042298.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1042298.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	11200039
Sequences flagged as poor quality	0
Sequence length	43
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	57167	0.5104178655092183	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	53557	0.47818583488861066	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	39228	0.35024878038371116	No Hit
CTCTAATACTGGTGATGCTAGAGGTGATGTTTTTGGTAAACAG	17310	0.15455303325283062	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	16513	0.14743698660335022	No Hit
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCC	14490	0.12937454949933658	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTG	11826	0.10558891803858898	No Hit
AGCATGTACTGCTCGGAGGTTGGGTTCTGCTCCGAGGTCGCCC	11626	0.10380320997096527	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTT	11207	0.10006215156929364	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	21625	17.871216	1
TTAACGG	3640	15.501373	35
TAACGGC	3635	15.471802	36
CCGAGTT	1580	15.338608	13
GGGGTTA	3220	14.420808	6
GTATTAG	5710	14.288091	1
AACGGCC	4025	14.156521	37
GGGTAAG	2255	14.028824	1
TATTAGA	5000	13.986	2
CTCTAAT	4565	13.98138	1
GCCGAGT	1710	13.9561405	12
TAGGACC	2625	13.954285	4
ATTAGAG	4490	13.802896	3
AATACTG	5680	13.647007	5
TTTAACG	4205	13.638525	34
GGTAAAC	4410	13.549887	35
TTTAGCG	925	13.4	26
CTAATAC	6020	13.398672	3
TAGGGGT	3595	13.328233	4
TAATACT	6440	13.300467	4