ERR1042283.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1042283.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6606299
Sequences flagged as poor quality	0
Sequence length	43
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	48140	0.7286984739867208	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	35211	0.5329913163179566	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	29185	0.44177534198800267	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	28776	0.4355842810021163	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC	18645	0.28223064078692167	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG	13734	0.20789249775101004	No Hit
GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA	11595	0.1755143083896142	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9626	0.1457094206604939	No Hit
GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA	8661	0.13110214963022412	No Hit
TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAG	7145	0.10815435389769673	No Hit
GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG	6989	0.10579297122337333	No Hit
AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6914	0.10465769109148709	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTATA	215	16.348837	2
ACGGACC	1490	14.651007	8
TCTAGCG	850	14.582354	28
AAGACGG	1605	14.523365	5
TTAACGG	385	14.4155855	35
TACCGTC	1075	14.111629	7
GACGGAC	1595	13.918494	7
GTATAAC	940	13.579786	1
TTAGACT	580	13.396551	4
CGAACGT	460	13.271739	4
TAACGGC	405	13.246914	36
CGCAAGA	1760	13.244318	2
CTAGCGG	950	13.2421055	29
AGACGGA	1735	13.221901	6
CGGACCA	1685	13.175075	9
TCGTTTA	1005	13.069653	30
TTATACC	1065	13.028169	4
TTAGAGT	1080	13.018518	4
TAACGCC	1085	12.958526	4
TAATACT	1820	12.909342	4