ERR1042279.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1042279.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7932220
Sequences flagged as poor quality	0
Sequence length	43
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	20349	0.2565360012707666	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC	20126	0.2537246823713916	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	15711	0.1980656108882507	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14426	0.18186585848602282	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	13288	0.16751930733136497	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG	12070	0.1521642112800704	No Hit
GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA	11671	0.1471340936080946	No Hit
GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTAC	8341	0.10515341228558965	No Hit
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT	8181	0.10313632249231615	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAGACCG	95	7.0680755E-5	15.578948	5
TTAACGG	535	0.0	15.560749	35
TAACGGC	525	0.0	15.152382	36
AAGACGG	2475	0.0	14.501011	5
GTATTAG	3195	0.0	14.186228	1
TATAACG	525	0.0	14.095239	2
ATACCGT	2060	0.0	13.830096	6
ACCGTCG	1690	0.0	13.792898	8
TACCGTC	1830	0.0	13.748633	7
GACGGAC	2530	0.0	13.673913	7
ACGGACC	2550	0.0	13.639216	8
TATCTAG	2350	0.0	13.3042555	1
GGGGTTA	1045	0.0	13.277513	6
TATACTG	1060	0.0	13.264152	5
TAATACT	1635	0.0	13.238532	4
ATTAGAG	2030	0.0	13.214286	3
CGCAAGA	2665	0.0	13.050657	2
CGTCGTA	1815	0.0	12.944903	10
CAAGACG	2960	0.0	12.750001	4
CCGTCGT	1830	0.0	12.737704	9