Basic Statistics
Measure | Value |
---|---|
Filename | ERR1042210.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 7937075 |
Sequences flagged as poor quality | 0 |
Sequence length | 43 |
%GC | 48 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT | 12778 | 0.16099129717181707 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT | 11819 | 0.14890876046906448 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 5925 | 0.0 | 17.953587 | 1 |
ACGGACC | 1525 | 0.0 | 16.377048 | 8 |
GACGGAC | 1530 | 0.0 | 15.477124 | 7 |
GTATTAG | 2130 | 0.0 | 15.199531 | 1 |
TATACTG | 1760 | 0.0 | 14.926136 | 5 |
AAGACGG | 1915 | 0.0 | 14.877284 | 5 |
TAGACCG | 150 | 8.1203325E-8 | 14.8 | 5 |
TAACGCC | 945 | 0.0 | 14.291005 | 4 |
CGGACCA | 1770 | 0.0 | 14.214689 | 9 |
CTTACAC | 1420 | 0.0 | 14.200705 | 3 |
ATTGACG | 1230 | 0.0 | 14.138212 | 32 |
CGCAAGA | 1825 | 0.0 | 13.8876705 | 2 |
AGACGGA | 1815 | 0.0 | 13.6584015 | 6 |
TCGTTTA | 925 | 0.0 | 13.6 | 30 |
TAAGACT | 1415 | 0.0 | 13.597173 | 4 |
TTGACGG | 1270 | 0.0 | 13.547244 | 33 |
TCTAGAC | 875 | 0.0 | 13.320001 | 3 |
TAATACT | 1875 | 0.0 | 13.221333 | 4 |
TCTATAC | 1050 | 0.0 | 13.214287 | 3 |
CGAACGT | 365 | 0.0 | 13.178082 | 4 |