Basic Statistics
Measure | Value |
---|---|
Filename | ERR1042085.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 4074118 |
Sequences flagged as poor quality | 0 |
Sequence length | 43 |
%GC | 51 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGC | 5246 | 0.12876406623470404 | No Hit |
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT | 5203 | 0.1277086230688458 | No Hit |
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGA | 4944 | 0.12135141888379276 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TCTAGCG | 605 | 0.0 | 18.041323 | 28 |
TATACTG | 525 | 0.0 | 17.266666 | 5 |
CTAGCGG | 635 | 0.0 | 16.897636 | 29 |
TTAACGG | 460 | 0.0 | 16.48913 | 35 |
AAGACGG | 1075 | 0.0 | 15.832559 | 5 |
GGTATCA | 3250 | 0.0 | 15.8246155 | 1 |
CGAACGT | 375 | 0.0 | 15.786666 | 4 |
TAACGGC | 500 | 0.0 | 15.54 | 36 |
GACGGAC | 1055 | 0.0 | 15.43128 | 7 |
GTTCAAA | 1320 | 0.0 | 15.416667 | 1 |
ATTGACG | 995 | 0.0 | 15.246231 | 32 |
TCGTTTA | 620 | 0.0 | 15.217742 | 30 |
ACGGACC | 1070 | 0.0 | 15.214952 | 8 |
TAATACT | 810 | 0.0 | 14.845679 | 4 |
TCGAACG | 400 | 0.0 | 14.8 | 3 |
GTATTAG | 1575 | 0.0 | 14.68254 | 1 |
ATTAGAG | 905 | 0.0 | 14.309392 | 3 |
TACGACG | 915 | 0.0 | 14.153006 | 5 |
TATTAGA | 785 | 0.0 | 14.140127 | 2 |
TAAACGC | 725 | 0.0 | 14.034483 | 28 |