Basic Statistics
Measure | Value |
---|---|
Filename | ERR1042062.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 9718303 |
Sequences flagged as poor quality | 0 |
Sequence length | 43 |
%GC | 49 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT | 18599 | 0.19138114956901425 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT | 16831 | 0.17318867296070106 | No Hit |
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT | 12605 | 0.1297037147329117 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 6650 | 0.0 | 24.342106 | 1 |
GTATCAA | 10320 | 0.0 | 15.64971 | 2 |
ACGGACC | 1610 | 0.0 | 15.62733 | 8 |
GACGGAC | 1595 | 0.0 | 15.310344 | 7 |
TAACGCC | 1165 | 0.0 | 15.244636 | 4 |
TCGTTTA | 1130 | 0.0 | 15.061946 | 30 |
TCTAGCG | 755 | 0.0 | 14.211921 | 28 |
TCTATAC | 1440 | 0.0 | 14.003472 | 3 |
TATACTG | 1770 | 0.0 | 13.79661 | 5 |
CGAACGA | 765 | 0.0 | 13.542483 | 16 |
AAGACGG | 1940 | 0.0 | 13.541237 | 5 |
CTAGCGG | 810 | 0.0 | 13.475308 | 29 |
AATAACG | 1315 | 0.0 | 13.365019 | 2 |
AACGCCG | 1335 | 0.0 | 13.30337 | 5 |
ATAACGC | 1535 | 0.0 | 13.257329 | 3 |
CGGACCA | 1895 | 0.0 | 13.1794195 | 9 |
ATACCGA | 425 | 0.0 | 13.058824 | 6 |
CGCATCG | 1335 | 0.0 | 13.0262165 | 13 |
TATCCCG | 585 | 0.0 | 12.965812 | 5 |
CGCAAGA | 1970 | 0.0 | 12.865481 | 2 |