Basic Statistics
Measure | Value |
---|---|
Filename | ERR1042058.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 8765072 |
Sequences flagged as poor quality | 0 |
Sequence length | 43 |
%GC | 50 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT | 9693 | 0.1105866557627821 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 4360 | 0.0 | 23.676605 | 1 |
ACGGACC | 1955 | 0.0 | 16.654732 | 8 |
GACGGAC | 1900 | 0.0 | 16.455263 | 7 |
AAGACGG | 2255 | 0.0 | 16.079823 | 5 |
CGAACGA | 1140 | 0.0 | 15.903508 | 16 |
TCGTTTA | 1355 | 0.0 | 15.701106 | 30 |
GTATCAA | 6670 | 0.0 | 15.393553 | 2 |
ACGAACG | 1180 | 0.0 | 15.050849 | 15 |
TAACGAA | 1215 | 0.0 | 14.769547 | 13 |
AGACGGA | 2210 | 0.0 | 14.649322 | 6 |
ATAACGA | 1225 | 0.0 | 14.497959 | 12 |
CGCAAGA | 2290 | 0.0 | 14.460699 | 2 |
TACCGTC | 1410 | 0.0 | 14.432624 | 7 |
TCGCTAA | 270 | 0.0 | 14.388888 | 14 |
CGGACCA | 2275 | 0.0 | 14.312089 | 9 |
TATACCG | 350 | 0.0 | 14.271429 | 5 |
CGTTATT | 1180 | 0.0 | 14.266951 | 2 |
TACGACG | 1275 | 0.0 | 14.219607 | 5 |
GTATTAG | 2200 | 0.0 | 14.211363 | 1 |
TAACGCC | 1495 | 0.0 | 14.107023 | 4 |