Basic Statistics
Measure | Value |
---|---|
Filename | ERR1042041.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 10317260 |
Sequences flagged as poor quality | 0 |
Sequence length | 43 |
%GC | 49 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT | 24289 | 0.23542103232835074 | No Hit |
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT | 18488 | 0.17919486375258548 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT | 17577 | 0.17036500000969249 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 8025 | 0.0 | 22.45358 | 1 |
CTAGCGG | 1445 | 0.0 | 16.387545 | 29 |
TAACGGC | 385 | 0.0 | 15.376623 | 36 |
TCTAGCG | 1510 | 0.0 | 15.31457 | 28 |
CGCAATA | 1530 | 0.0 | 15.114379 | 36 |
TATACTG | 2110 | 0.0 | 15.080569 | 5 |
TACACCG | 765 | 0.0 | 14.9934635 | 5 |
GACGGAC | 2160 | 0.0 | 14.474538 | 7 |
AAGACGG | 2405 | 0.0 | 14.461537 | 5 |
GTATCAA | 12460 | 0.0 | 14.416933 | 2 |
TTAACGG | 385 | 0.0 | 14.415584 | 35 |
TCGTTTA | 1335 | 0.0 | 14.411985 | 30 |
GTATTAG | 2760 | 0.0 | 14.277174 | 1 |
CAAGACG | 2515 | 0.0 | 14.196818 | 4 |
ACGGACC | 2295 | 0.0 | 14.106754 | 8 |
CGTTATT | 1740 | 0.0 | 13.609195 | 2 |
GTAAACG | 820 | 0.0 | 13.536585 | 27 |
ATTGACG | 2165 | 0.0 | 13.501155 | 32 |
GCGTTAT | 1955 | 0.0 | 13.342711 | 1 |
TTGACGG | 2185 | 0.0 | 13.1235695 | 33 |