Basic Statistics
Measure | Value |
---|---|
Filename | ERR1042028.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2577037 |
Sequences flagged as poor quality | 0 |
Sequence length | 43 |
%GC | 45 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT | 21275 | 0.825560517757409 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT | 15540 | 0.6030181173184552 | No Hit |
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT | 13804 | 0.5356539312396369 | No Hit |
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 5911 | 0.22937194925800444 | No Hit |
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 2761 | 0.1071385470988581 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 5910 | 0.0 | 21.692892 | 1 |
TTAACGG | 145 | 7.2759576E-12 | 19.13793 | 35 |
TAGACCG | 50 | 0.0070371972 | 18.499998 | 5 |
CTAATCG | 125 | 8.592906E-9 | 17.76 | 26 |
TCTAACG | 100 | 5.883494E-6 | 16.65 | 2 |
AATCGTC | 155 | 7.221388E-9 | 15.516129 | 28 |
GTATTAG | 745 | 0.0 | 15.147651 | 1 |
CTGTGCG | 330 | 0.0 | 15.136364 | 9 |
GTCTTAC | 270 | 0.0 | 15.074075 | 1 |
GCGTAGA | 75 | 0.0041062464 | 14.8 | 1 |
CGTTAAC | 100 | 1.0942013E-4 | 14.799999 | 9 |
CGCACTA | 250 | 0.0 | 14.799999 | 29 |
CTAGCGG | 100 | 1.0942013E-4 | 14.799999 | 29 |
GTATCAA | 8725 | 0.0 | 14.757593 | 2 |
ACGGACC | 240 | 0.0 | 14.645834 | 8 |
CCGTCGT | 140 | 6.002683E-7 | 14.535715 | 9 |
TAGTCGG | 140 | 6.002683E-7 | 14.535715 | 30 |
TAACGCC | 210 | 1.364242E-10 | 14.095238 | 4 |
AATACTG | 660 | 0.0 | 14.015151 | 5 |
TAGCGTA | 80 | 0.006301421 | 13.875 | 5 |