ERR1042003.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1042003.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	13840979
Sequences flagged as poor quality	0
Sequence length	43
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	109159	0.7886653104523892	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	94692	0.684142357271115	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	79640	0.5753928244526634	No Hit
GTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTGGT	31753	0.22941296276802384	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	30512	0.22044683399924236	No Hit
GTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTG	25336	0.1830506353632933	No Hit
CTTCCGTACTCTGCGTTGATACCACTGCTTCCGTACTCTGCGT	23355	0.16873806397654387	No Hit
GAGTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTG	21558	0.1557548783218297	No Hit
TCCGTACTCTGCGTTGATACCACTGCTTCCGTACTCTGCGTTG	20852	0.15065408306738998	No Hit
TTCCCGTACTCTGCGTTGATACCACTGCTTCCCGTACTCTGCG	18652	0.13475925366262026	No Hit
CCCGTACTCTGCGTTGATACCACTGCTTCCCGTACTCTGCGTT	15204	0.1098477210318721	No Hit
GAGTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAG	14432	0.10427008089528926	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TTAACGG	2040	14.328431	35
GTCGGGA	2385	13.884696	2
TAATACT	4115	13.577157	4
GGGGTTA	2525	13.261387	6
TATTAGA	2925	13.218803	2
AATACTG	3520	13.191763	5
TAACGGC	2245	12.855233	36
TCTATAC	925	12.8	3
ACCGTCC	610	12.737705	8
ACACCGT	860	12.691861	6
CTAGATA	2115	12.333333	3
TCTAATA	3180	12.275157	2
GTATTAG	5965	12.002514	1
ATGCTAG	2690	11.966542	15
TAGGACC	2880	11.88368	4
ATTAGAG	3255	11.87865	3
ATACTGG	3610	11.786703	6
TCTAGAT	2550	11.752941	2
TATACCG	1235	11.68421	6
TAAACGC	1380	11.663044	28