ERR1041993.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1041993.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	9733571
Sequences flagged as poor quality	0
Sequence length	43
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	105440	1.0832612203681464	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	102857	1.0567241971112145	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	75758	0.778316611652599	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	29088	0.29884201800140975	No Hit
GTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTGGT	15284	0.15702356308902457	No Hit
GTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTG	12287	0.12623321903132984	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11005	0.113062307759403	No Hit
GTACAAAGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGC	10977	0.11277464355065576	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGAT	10942	0.11241506328972173	No Hit
GAGTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTG	10384	0.10668232655825904	No Hit
GGATTACTCCGGTCTGAACTCAGATCACGTAGGACTTTAATCG	10274	0.10555221716675206	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGAATC	765	19.346405	33
GGCGAAT	880	16.607954	32
GACTAAG	935	15.828877	26
GGTATCA	47370	15.196011	1
ATCTCCG	1020	14.872549	10
CGAATCT	1020	14.872549	34
GTCGGGA	3165	14.729857	2
GTACTAT	1575	14.56508	1
ACTAAGG	1045	13.985645	27
TATTAGA	2455	13.8655815	2
TCTAATA	2610	13.821839	2
ATCTCGT	1090	13.747706	37
TAATACT	3530	13.67847	4
TTAACGG	1895	13.37467	35
TCTATCG	1195	13.3138075	31
ATACTGG	2645	13.219281	6
TCTAGAT	2810	13.16726	2
AATACTG	2785	13.086176	5
ACCGCCT	2085	12.954436	12
GTATTAG	4595	12.88357	1