Basic Statistics
Measure | Value |
---|---|
Filename | ERR1041986.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 18477649 |
Sequences flagged as poor quality | 0 |
Sequence length | 43 |
%GC | 49 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 6740 | 0.0 | 22.232939 | 1 |
CTTATAC | 12215 | 0.0 | 17.417109 | 37 |
TCTTATA | 21310 | 0.0 | 15.965039 | 37 |
GTATCAA | 11105 | 0.0 | 13.677173 | 1 |
CTCTTAT | 33240 | 0.0 | 13.25722 | 37 |
TATACCG | 620 | 0.0 | 12.2338705 | 5 |
TATACTG | 3440 | 0.0 | 12.207849 | 5 |
TCAACGC | 15355 | 0.0 | 12.20482 | 3 |
ATCAACG | 15390 | 0.0 | 12.080897 | 2 |
CAACGCA | 15915 | 0.0 | 11.810243 | 4 |
GTATTAG | 3445 | 0.0 | 11.760522 | 1 |
TTAGACT | 1900 | 0.0 | 11.392105 | 4 |
TATCAAC | 16825 | 0.0 | 11.226449 | 1 |
TAATACT | 4650 | 0.0 | 11.17957 | 4 |
CTAATAC | 3665 | 0.0 | 11.155525 | 3 |
AACGCAG | 17085 | 0.0 | 11.131402 | 5 |
ATAATAC | 3285 | 0.0 | 10.8691025 | 3 |
TCTATAC | 2450 | 0.0 | 10.646938 | 3 |
AGTACCG | 1485 | 0.0 | 10.589226 | 5 |
ATAGTAC | 2915 | 0.0 | 10.3447695 | 3 |