ERR1041917.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1041917.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	11743301
Sequences flagged as poor quality	0
Sequence length	43
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	82401	0.7016851564990116	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	65705	0.5595104817631771	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	41282	0.35153659094661716	No Hit
GTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTG	36695	0.31247602356441345	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	31690	0.26985598001788424	No Hit
GAGTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAG	22753	0.19375301714569013	No Hit
TTCCCGTACTCTGCGTTGATACCACTGCTTCCCGTACTCTGCG	21970	0.18708538595749183	No Hit
CCCGTACTCTGCGTTGATACCACTGCTTCCCGTACTCTGCGTT	15722	0.13388058434336308	No Hit
GTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTGGT	14109	0.12014509378581031	No Hit
GGTATCAACGCAGAGTACGGGAAGCAGTGGTATCAACGCAGAG	13996	0.11918284305239217	No Hit
TATCAACGCAGAGTACGGGAAGCAGTGGTATCAACGCAGAGTA	12796	0.10896425119308448	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TATACAC	2300	15.121739	3
ATCTCGT	1945	14.74293	37
CGAGACA	1945	14.647815	23
AATCTCG	2110	13.85308	36
ACGAGAC	2145	13.3682995	22
CCCACGA	2265	13.068433	19
GTACTAG	715	12.678322	1
ATCTCCG	2375	12.618948	10
TTAACGG	1710	12.441521	35
GGGGTTA	2145	12.333334	6
TCTCCGA	2400	12.333333	11
ATACACA	3505	12.298145	4
GGGTTAG	2090	12.038279	7
TAGGGGT	2110	12.0118475	4
TACACAT	3035	11.947282	5
GGCAATC	2525	11.649506	33
ATTAGAC	720	11.5625	3
GCCCACG	2615	11.5315485	18
TAACGGC	1815	11.517906	36
TAATACT	3475	11.499281	4