Basic Statistics
Measure | Value |
---|---|
Filename | ERR1041905.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 4589860 |
Sequences flagged as poor quality | 0 |
Sequence length | 43 |
%GC | 52 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT | 6472 | 0.14100647950046405 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT | 6318 | 0.1376512573368251 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TTAACGG | 995 | 0.0 | 14.874372 | 35 |
TCGCTAA | 150 | 8.117786E-8 | 14.8 | 14 |
TATACTG | 375 | 0.0 | 14.306667 | 5 |
GGTATCA | 11555 | 0.0 | 13.913025 | 1 |
TATTAGA | 1370 | 0.0 | 13.908759 | 2 |
GTACTAT | 495 | 0.0 | 13.828283 | 1 |
TCTAGCG | 230 | 4.0017767E-11 | 13.673913 | 28 |
TCTTATA | 3095 | 0.0 | 13.628432 | 37 |
ATTAGAG | 1415 | 0.0 | 13.335689 | 3 |
TAACGGC | 1135 | 0.0 | 13.202643 | 36 |
TAAACCG | 100 | 0.0018339329 | 12.950001 | 5 |
CTTATAC | 2390 | 0.0 | 12.849372 | 37 |
ATGTACG | 305 | 0.0 | 12.737705 | 11 |
ACCGTCC | 350 | 0.0 | 12.685715 | 8 |
CGAACTA | 970 | 0.0 | 12.396907 | 24 |
ATCTCGT | 915 | 0.0 | 12.333333 | 37 |
CTATACG | 165 | 3.8099606E-6 | 12.333333 | 4 |
GACACAT | 1390 | 0.0 | 12.244604 | 26 |
GTTTAAC | 1360 | 0.0 | 12.242647 | 33 |
TACTCCG | 1345 | 0.0 | 12.241635 | 5 |