Basic Statistics
Measure | Value |
---|---|
Filename | ERR1041870.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 6098967 |
Sequences flagged as poor quality | 0 |
Sequence length | 43 |
%GC | 56 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 3310 | 0.0 | 29.957705 | 1 |
GTATCAA | 5025 | 0.0 | 19.475622 | 2 |
GTATACG | 145 | 1.5643309E-10 | 17.862068 | 1 |
TTAACGG | 405 | 0.0 | 15.987655 | 35 |
TTATACG | 290 | 0.0 | 15.948276 | 35 |
GTATTAG | 870 | 0.0 | 15.097702 | 1 |
TAATACG | 260 | 0.0 | 14.942307 | 4 |
TATATAC | 285 | 0.0 | 14.929824 | 3 |
TTTAGCG | 435 | 0.0 | 14.885058 | 26 |
GTCTATA | 250 | 0.0 | 14.799999 | 1 |
TATACGA | 330 | 0.0 | 14.015151 | 36 |
TATCAAC | 7060 | 0.0 | 13.966714 | 3 |
GTACGTA | 215 | 1.9826984E-10 | 13.767442 | 13 |
GTTTAGG | 755 | 0.0 | 13.721855 | 1 |
GTCTAAT | 230 | 4.0017767E-11 | 13.673913 | 1 |
TTTAACG | 475 | 0.0 | 13.631578 | 34 |
TCAACGC | 7225 | 0.0 | 13.622146 | 5 |
TATTAGA | 695 | 0.0 | 13.57554 | 2 |
ATCAACG | 7245 | 0.0 | 13.533471 | 4 |
TATACCG | 275 | 0.0 | 13.454546 | 5 |