Basic Statistics
Measure | Value |
---|---|
Filename | ERR1041864.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 4501729 |
Sequences flagged as poor quality | 0 |
Sequence length | 43 |
%GC | 55 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT | 7322 | 0.16264861789770108 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT | 6721 | 0.14929819187250054 | No Hit |
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT | 4830 | 0.10729210932066324 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 3585 | 0.0 | 30.91074 | 1 |
GTATCAA | 5355 | 0.0 | 20.48646 | 2 |
CGCTATA | 545 | 0.0 | 16.29358 | 2 |
TTAACGG | 175 | 1.3278623E-10 | 15.857143 | 35 |
GTACTAG | 205 | 5.456968E-12 | 15.341464 | 1 |
TCGCTAT | 610 | 0.0 | 15.163935 | 1 |
TATACTG | 490 | 0.0 | 14.724489 | 5 |
TATCAAC | 7580 | 0.0 | 14.717018 | 3 |
GTGTTAG | 795 | 0.0 | 14.660377 | 1 |
ATCAACG | 7505 | 0.0 | 14.592938 | 4 |
TTTAGCG | 165 | 1.648732E-8 | 14.575759 | 26 |
TCAACGC | 7665 | 0.0 | 14.360731 | 5 |
GTATAGG | 380 | 0.0 | 14.118422 | 1 |
CAACGCA | 7790 | 0.0 | 14.05905 | 6 |
TAGGACA | 515 | 0.0 | 14.009708 | 4 |
CTATACT | 415 | 0.0 | 13.819277 | 4 |
AACGCAG | 8075 | 0.0 | 13.631579 | 7 |
CTAGTAC | 245 | 7.2759576E-12 | 13.591836 | 3 |
GTATAAG | 345 | 0.0 | 13.405797 | 1 |
TCTATAC | 290 | 0.0 | 13.39655 | 3 |