Basic Statistics
Measure | Value |
---|---|
Filename | ERR1041857.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 5755041 |
Sequences flagged as poor quality | 0 |
Sequence length | 43 |
%GC | 54 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT | 9859 | 0.1713106822349311 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT | 9170 | 0.15933856943851488 | No Hit |
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT | 6499 | 0.11292708427272716 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 4010 | 0.0 | 29.618452 | 1 |
GTATCAA | 5940 | 0.0 | 19.776936 | 2 |
TACGCTA | 75 | 2.0690812E-4 | 17.266666 | 5 |
TATACCG | 280 | 0.0 | 13.875 | 5 |
GTATTAG | 710 | 0.0 | 13.809859 | 1 |
CTAGACA | 565 | 0.0 | 13.752213 | 4 |
GTTATAG | 325 | 0.0 | 13.661537 | 1 |
TATACTG | 720 | 0.0 | 13.361111 | 5 |
GTGTTAG | 1000 | 0.0 | 13.320001 | 1 |
GTACAAG | 1205 | 0.0 | 13.20332 | 1 |
GTATTAA | 410 | 0.0 | 13.085366 | 1 |
ATCAACG | 9085 | 0.0 | 13.0528345 | 2 |
TATAGAC | 370 | 0.0 | 13.0 | 3 |
TCAACGC | 9200 | 0.0 | 12.990217 | 3 |
TATCAAC | 9170 | 0.0 | 12.972193 | 3 |
CAACGCA | 9180 | 0.0 | 12.897603 | 4 |
GTCTTAG | 750 | 0.0 | 12.826666 | 1 |
GTGTATG | 1115 | 0.0 | 12.609865 | 1 |
CGCTATA | 455 | 0.0 | 12.604395 | 2 |
AGTACTG | 1160 | 0.0 | 12.599137 | 5 |