Basic Statistics
Measure | Value |
---|---|
Filename | ERR1041845.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 22994747 |
Sequences flagged as poor quality | 0 |
Sequence length | 43 |
%GC | 52 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 17250 | 0.0 | 28.30232 | 1 |
GTATCAA | 26570 | 0.0 | 18.332893 | 2 |
TCGCTAA | 1415 | 0.0 | 17.519434 | 14 |
CGCTATA | 2990 | 0.0 | 16.643814 | 2 |
CTTATAC | 15765 | 0.0 | 16.111958 | 37 |
GTATTAG | 5020 | 0.0 | 15.994023 | 1 |
TCTTATA | 26055 | 0.0 | 15.414891 | 37 |
TATACAC | 5780 | 0.0 | 15.171281 | 37 |
TCGCTAT | 3580 | 0.0 | 14.727653 | 1 |
TATTAGA | 4060 | 0.0 | 14.125616 | 2 |
GTATTAA | 1635 | 0.0 | 13.464831 | 1 |
TAATACT | 4290 | 0.0 | 13.411423 | 4 |
CTAATAC | 4935 | 0.0 | 13.270516 | 3 |
TATATTG | 4710 | 0.0 | 13.1581745 | 5 |
ATTAGAG | 4060 | 0.0 | 13.03202 | 3 |
GCTATAT | 4170 | 0.0 | 12.910072 | 3 |
CGTCTAA | 1895 | 0.0 | 12.886543 | 1 |
GTATAGA | 2065 | 0.0 | 12.72155 | 1 |
GTGTAAG | 3325 | 0.0 | 12.574436 | 1 |
ATCAACG | 38985 | 0.0 | 12.556368 | 4 |