Basic Statistics
Measure | Value |
---|---|
Filename | ERR1041839.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 36492474 |
Sequences flagged as poor quality | 0 |
Sequence length | 43 |
%GC | 50 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 18335 | 0.0 | 25.04336 | 1 |
GTATTAG | 11545 | 0.0 | 16.72932 | 1 |
TTAACGG | 5980 | 0.0 | 16.241638 | 35 |
GTATCAA | 28890 | 0.0 | 15.810487 | 2 |
TAACGGC | 6215 | 0.0 | 15.74658 | 36 |
TATTAGA | 10020 | 0.0 | 15.545907 | 2 |
ATTAGAG | 8800 | 0.0 | 14.926136 | 3 |
CTTATAC | 17200 | 0.0 | 14.918313 | 37 |
TTTAACG | 7195 | 0.0 | 14.707435 | 34 |
TAATACT | 9635 | 0.0 | 14.458225 | 4 |
TCTTATA | 25825 | 0.0 | 14.248402 | 37 |
CGCTATA | 2845 | 0.0 | 14.240773 | 2 |
TATACTG | 5295 | 0.0 | 13.695939 | 5 |
TTAGAGG | 12530 | 0.0 | 13.627692 | 4 |
CTAATAC | 10180 | 0.0 | 13.611492 | 3 |
TCGCTAA | 2005 | 0.0 | 13.563591 | 14 |
GTATAGG | 6865 | 0.0 | 13.231609 | 1 |
TACCCCG | 4890 | 0.0 | 13.165644 | 5 |
CTCTAAT | 7470 | 0.0 | 13.051539 | 1 |
CGAACTA | 5325 | 0.0 | 12.958685 | 29 |