Basic Statistics
Measure | Value |
---|---|
Filename | ERR1041822.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 6915960 |
Sequences flagged as poor quality | 0 |
Sequence length | 43 |
%GC | 53 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TCGCTAA | 315 | 0.0 | 19.968254 | 14 |
GGTATCA | 7270 | 0.0 | 19.314304 | 1 |
TATTAGA | 960 | 0.0 | 17.921875 | 2 |
GTATTAG | 1195 | 0.0 | 17.02929 | 1 |
CGTCTAA | 325 | 0.0 | 15.938461 | 1 |
ATTAGAG | 1095 | 0.0 | 15.881279 | 3 |
TAAGTCG | 95 | 7.067867E-5 | 15.578948 | 5 |
TAATACT | 910 | 0.0 | 15.45055 | 4 |
ATAATAC | 540 | 0.0 | 15.416667 | 3 |
GTATCAA | 9515 | 0.0 | 14.679454 | 2 |
CTTATAC | 5135 | 0.0 | 14.518988 | 37 |
TCTTATA | 7845 | 0.0 | 14.172721 | 37 |
GTATATA | 525 | 0.0 | 14.095238 | 1 |
TATACAC | 2180 | 0.0 | 13.917431 | 37 |
TATACTG | 750 | 0.0 | 13.813334 | 5 |
TAATACA | 550 | 0.0 | 13.79091 | 4 |
TTAGAGG | 1375 | 0.0 | 13.723636 | 4 |
GTATTAA | 410 | 0.0 | 13.536585 | 1 |
CGTATTA | 195 | 1.0286385E-8 | 13.282052 | 15 |
TCTAGAC | 645 | 0.0 | 13.193798 | 3 |