ERR1041797.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1041797.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	32778953
Sequences flagged as poor quality	0
Sequence length	43
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	121493	0.37064332103590986	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	100594	0.3068859459910144	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	76310	0.23280182255973828	No Hit
TCCCAATGGTGCAGCCGCTATTAAAGGTTCGTTTGTTCAACGA	42368	0.1292536707929628	No Hit
CCATTGGGATGTCCTGATCCAACATCGAGGTCGTAAACCCTAT	41288	0.12595887367116332	No Hit
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCC	41156	0.12555617624516563	No Hit
GGATTACTCCGGTCTGAACTCAGATCACGTAGGACTTTAATCG	41123	0.1254555018886662	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	34129	0.10411863978693889	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGAATC	7165	15.982554	33
GACTAAG	7435	15.551447	26
GGCGAAT	7695	15.074076	32
TATTAGA	13835	14.949767	2
ACTAAGG	7915	14.631712	27
ATTAGAG	12930	14.608275	3
AGACTAA	8020	14.370949	25
TATACAC	8215	14.322581	3
TTAACGG	11085	14.085702	35
ACGAGAC	8330	13.991598	22
ATCTCGT	8080	13.806313	37
TACACAT	9605	13.636647	5
GGTATCA	107310	13.628041	1
TACCCCG	7450	13.608054	5
TAACGGC	11570	13.511236	36
AATACTG	10945	13.437643	5
CGAATCT	8670	13.40023	34
GTATTAG	18890	13.231075	1
GGTAAAC	8360	13.166865	35
TCTAATA	10820	13.13124	2