Basic Statistics
Measure | Value |
---|---|
Filename | ERR1041791.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 5291901 |
Sequences flagged as poor quality | 0 |
Sequence length | 43 |
%GC | 51 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT | 8923 | 0.16861615513971254 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT | 8425 | 0.15920554825194197 | No Hit |
GGATTACTCCGGTCTGAACTCAGATCACGTAGGACTTTAATCG | 6304 | 0.11912543337450945 | No Hit |
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCC | 5332 | 0.10075774282247534 | No Hit |
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT | 5310 | 0.10034201320092723 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
ATTAGAG | 1555 | 0.0 | 14.633441 | 3 |
TATTAGA | 1670 | 0.0 | 14.511976 | 2 |
TAATACT | 1855 | 0.0 | 14.361186 | 4 |
TTAACGG | 1470 | 0.0 | 14.221088 | 35 |
CTCTAAT | 1415 | 0.0 | 13.727915 | 1 |
AATACTG | 1740 | 0.0 | 13.715518 | 5 |
GTATTAG | 2285 | 0.0 | 13.439824 | 1 |
GGTATCA | 8345 | 0.0 | 13.412223 | 1 |
TAACGGC | 1545 | 0.0 | 13.411004 | 36 |
TCTAATA | 1580 | 0.0 | 13.231012 | 2 |
GGGTTAG | 955 | 0.0 | 13.172774 | 7 |
TACTCCG | 2405 | 0.0 | 12.923078 | 5 |
ATACTGG | 1760 | 0.0 | 12.823864 | 6 |
CTAATAC | 2350 | 0.0 | 12.753192 | 3 |
TAGACCG | 160 | 2.7000187E-6 | 12.718751 | 5 |
ATGCTAG | 1470 | 0.0 | 12.710884 | 15 |
CTAGTAC | 175 | 5.315469E-7 | 12.685714 | 3 |
GGGGTTA | 905 | 0.0 | 12.674034 | 6 |
CCGAGTT | 765 | 0.0 | 12.575163 | 13 |
TATACTG | 490 | 0.0 | 12.459184 | 5 |