ERR1041757.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1041757.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6153007
Sequences flagged as poor quality	0
Sequence length	43
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	70674	1.1486091272121095	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	48571	0.7893863927019749	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	37463	0.6088567752320126	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	27921	0.453778128320023	No Hit
CTTATACACATCTCCGAGCCCACGAGACAGGCAGAAATCTCGT	11784	0.19151611561631574	No Hit
GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA	9782	0.15897917879826887	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6747	0.10965370265302803	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6558	0.10658203379258305	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CCGTCTT	1120	15.857142	37
TACACAT	3470	15.034581	5
ATCTCCG	3040	14.909538	10
GCCGTCT	1170	14.705128	36
TTAACGG	505	14.653464	35
TATACTG	1015	14.399014	5
TATGCCG	1285	14.108949	33
ACGAGAC	3150	14.095238	22
ATCTCGT	3015	14.051411	37
CGAGACA	3145	14.0	23
TGCCGTC	1290	13.767442	35
AATCTCG	3080	13.694805	36
CCCACGA	3235	13.61051	19
TAACGGC	545	13.577982	36
ACACATC	3520	13.507102	6
CACGAGA	3280	13.367377	21
TCTCCGA	3395	13.18704	11
ACATCTC	3725	13.161074	8
GCCCACG	3375	13.155557	18
CTAGTAC	455	13.010988	3