Basic Statistics
Measure | Value |
---|---|
Filename | ERR1041755.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 7846181 |
Sequences flagged as poor quality | 0 |
Sequence length | 43 |
%GC | 46 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT | 23044 | 0.2936970227936368 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT | 22850 | 0.2912244823309582 | No Hit |
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT | 16615 | 0.21175907106909717 | No Hit |
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 8940 | 0.11394078214611669 | No Hit |
CTTATACACATCTCCGAGCCCACGAGACCAGAGAGGATCTCGT | 8575 | 0.10928883746118016 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 8275 | 0.0 | 21.30574 | 1 |
TTAACGG | 925 | 0.0 | 16.0 | 35 |
ATCTCCG | 2625 | 0.0 | 15.222857 | 10 |
TACACAT | 3380 | 0.0 | 14.887573 | 5 |
TATACTG | 1545 | 0.0 | 14.728156 | 5 |
TAACGGC | 995 | 0.0 | 14.688443 | 36 |
TAATACT | 2560 | 0.0 | 14.669922 | 4 |
ACGAGAC | 2705 | 0.0 | 14.6358595 | 22 |
GTATTAG | 2135 | 0.0 | 14.557377 | 1 |
CTAATAC | 2315 | 0.0 | 14.224622 | 3 |
ATCTCGT | 2555 | 0.0 | 14.191781 | 37 |
GTATCAA | 12415 | 0.0 | 14.171164 | 2 |
TCTCCGA | 2865 | 0.0 | 14.076789 | 11 |
CCCACGA | 2895 | 0.0 | 13.803108 | 19 |
CGCGTAT | 140 | 9.5749765E-6 | 13.214285 | 12 |
TCTATAC | 1135 | 0.0 | 13.039648 | 3 |
GTATACG | 300 | 0.0 | 12.95 | 1 |
ACACATC | 3445 | 0.0 | 12.941944 | 6 |
CTTATAC | 8210 | 0.0 | 12.911694 | 37 |
CGAGCCC | 3080 | 0.0 | 12.853896 | 15 |