ERR1041738.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1041738.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	10156824
Sequences flagged as poor quality	0
Sequence length	43
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	47699	0.4696251505391843	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	37949	0.3736305758571774	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	30879	0.3040222022159683	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	24331	0.2395532304192728	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC	23009	0.22653735065213298	No Hit
GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA	16145	0.15895717007600013	No Hit
GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA	14423	0.14200305134754723	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG	13678	0.13466808128210156	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	13184	0.1298043561648799	No Hit
GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTAC	10983	0.10813419628025453	No Hit
GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG	10359	0.10199054350060609	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10196	0.100385711123871	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GACGGAC	1955	15.897699	7
TTAACGG	585	15.811966	35
AAGACGG	2135	15.510538	5
ACGGACC	2135	15.077283	8
TAACGGC	620	14.919355	36
TATACTG	1680	14.866071	5
TCGTTTA	1560	14.823718	30
CGAACGT	730	14.19178	4
ATAACGC	2740	13.976277	3
TCGAACG	750	13.813334	3
TCTAGCG	1140	13.7938595	28
TAACGCC	1665	13.777778	4
CGGACCA	2355	13.747345	9
CGCAAGA	2435	13.675565	2
GTATTAG	3235	13.667697	1
CTAGCGG	1180	13.639831	29
AGACGGA	2380	13.6029415	6
ACCGTCG	1175	13.540424	8
TACCGTC	1270	13.255904	7
CGCATCG	1720	13.2296505	13