Basic Statistics
Measure | Value |
---|---|
Filename | ERR1041722.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 3916277 |
Sequences flagged as poor quality | 0 |
Sequence length | 43 |
%GC | 46 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT | 23017 | 0.5877265576464585 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT | 20316 | 0.5187579938804124 | No Hit |
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT | 13341 | 0.34065516816098557 | No Hit |
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 9158 | 0.23384454163993 | No Hit |
CTTATACACATCTCCGAGCCCACGAGACCAGAGAGGATCTCGT | 7808 | 0.19937302698455703 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 7775 | 0.0 | 21.628939 | 1 |
TTAACGG | 715 | 0.0 | 18.62937 | 35 |
TAACGGC | 725 | 0.0 | 18.11724 | 36 |
TACACAT | 2215 | 0.0 | 17.121895 | 5 |
ATCTCCG | 2045 | 0.0 | 16.464548 | 10 |
CCGTCTT | 720 | 0.0 | 16.1875 | 37 |
TATACAC | 2225 | 0.0 | 16.047192 | 3 |
GCCGTCT | 750 | 0.0 | 16.033335 | 36 |
AACGGCC | 865 | 0.0 | 15.612716 | 37 |
ACACATC | 2325 | 0.0 | 15.356989 | 6 |
GTATCAA | 11025 | 0.0 | 15.336961 | 2 |
ACATCTC | 2575 | 0.0 | 15.231069 | 8 |
CTAGTAC | 280 | 0.0 | 15.196429 | 3 |
TTTAACG | 900 | 0.0 | 14.8 | 34 |
ACGAGAC | 2270 | 0.0 | 14.588105 | 22 |
AGGTCGC | 940 | 0.0 | 14.563828 | 35 |
TATGCCG | 890 | 0.0 | 14.550563 | 33 |
AATACTG | 1430 | 0.0 | 14.48951 | 5 |
GTATTAG | 1620 | 0.0 | 14.388889 | 1 |
ATACACA | 2870 | 0.0 | 14.374564 | 4 |