ERR1041689.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1041689.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8410836
Sequences flagged as poor quality	0
Sequence length	43
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC	29178	0.3469096294351715	No Hit
GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA	18363	0.21832550295832662	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG	15730	0.18702064812582245	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	15331	0.1822767677315311	No Hit
GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTAC	12832	0.1525650957883378	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	12383	0.14722674416669163	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11770	0.13993852691932168	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	10789	0.12827500143862036	No Hit
GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG	9909	0.11781230783717575	No Hit
TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAG	9356	0.11123745606263159	No Hit
ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACAT	9283	0.11036952807069356	No Hit
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT	8467	0.1006677576402631	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TATACCG	325	18.215384	5
TATAACG	665	16.413534	2
ATACCGT	2355	14.140127	6
TAACGCA	835	13.958084	4
TAGAGTG	1910	13.753926	5
AAGACGG	2960	13.625001	5
TACCGTC	2175	13.609196	7
TCTATAC	890	13.511236	3
TATACTG	1415	13.204947	5
GTATAAC	1065	13.201878	1
ACCGTCG	2215	13.196388	8
CAAGACG	3160	13.172468	4
ACGGACC	2945	13.129032	8
GACGGAC	2920	13.114726	7
TACGACG	2575	13.075728	5
TTAGAGT	1855	13.06469	4
CGCAAGA	3025	13.026446	2
ACGACGG	2635	12.918406	6
TCTAGCG	1865	12.895443	28
TAATACT	1640	12.859756	4