ERR1041674.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1041674.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	5786834
Sequences flagged as poor quality	0
Sequence length	43
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	23922	0.41338666358841464	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC	17609	0.3042941961010113	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG	14627	0.25276342815432407	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	12878	0.22253964775903368	No Hit
GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA	12285	0.2122922482310707	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	9815	0.1696091507031306	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9537	0.1648051421554515	No Hit
CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG	9401	0.1624549797004718	No Hit
TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAG	9081	0.15692518568875485	No Hit
ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACAT	7954	0.13744994240373923	No Hit
GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG	7744	0.13382101508355	No Hit
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT	6880	0.11889057125191425	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCGTTTA	1190	15.857142	30
ACGGACC	1805	14.3490305	8
CGAACGA	800	14.337499	16
GACGGAC	1810	14.309392	7
ACCGTCG	1065	14.244131	8
AAGACGG	1950	14.230769	5
TAACGCC	1450	13.906896	4
CAAGACG	2170	13.81106	4
TACCGTC	1165	13.6566515	7
ATGGTCG	1360	13.602941	36
CGTTTAT	1420	13.549295	31
ATAACGC	1620	13.475308	3
CGCAAGA	1950	13.376923	2
GGTTATC	900	13.361112	2
TAGAGTG	1000	13.32	5
CCGTCGT	1115	13.273542	9
CCGGTCG	1450	13.268965	20
CGCATCG	1485	13.205387	13
CGTCGTA	1110	13.166667	10
TAACGGC	285	12.982457	36