ERR1041672.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1041672.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	195283
Sequences flagged as poor quality	0
Sequence length	43
%GC	54

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG	415	0.21251209782725583	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGC	322	0.16488890482018403	No Hit
CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG	312	0.1597681313785634	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC	278	0.1423575016770533	No Hit
GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA	252	0.12904349072883967	No Hit
ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACAT	251	0.1285314133846776	No Hit
GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG	206	0.10548793289738483	No Hit
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT	205	0.10497585555322277	No Hit
TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAG	199	0.1019033914882504	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTGTACA	30	3.588639E-4	30.833334	1
CTAGTGA	25	0.0054853144	29.599998	15
ACTCTTT	45	3.9858933E-6	28.777779	8
TATCTAG	35	8.84294E-4	26.428572	1
CGAACGA	45	1.3177237E-4	24.666668	16
AACGAAC	45	1.3177237E-4	24.666668	14
AGACTTT	40	0.001925482	23.125	6
TTTCGAG	40	0.001925482	23.125	12
TAGGGTG	40	0.001925482	23.125	5
TCTTTCG	40	0.001925482	23.125	10
TCCGATA	50	2.6909864E-4	22.199999	8
CCGATAA	50	2.6909864E-4	22.199999	9
TAACGAA	50	2.6909864E-4	22.199999	13
AACGAGA	50	2.6909864E-4	22.199999	18
ATAACGA	50	2.6909864E-4	22.199999	12
CGATAAC	50	2.6909864E-4	22.199999	10
ACGAACG	50	2.6909864E-4	22.199999	15
GTAATTG	45	0.0038146125	20.555557	24
CGTTATT	45	0.0038146125	20.555557	2
TTAAAAC	45	0.0038146125	20.555557	3