Basic Statistics
Measure | Value |
---|---|
Filename | ERR1041614.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 8290953 |
Sequences flagged as poor quality | 0 |
Sequence length | 42 |
%GC | 44 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT | 45625 | 0.5502986206772611 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT | 34246 | 0.4130526370128983 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTT | 22042 | 0.26585604815272745 | No Hit |
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGC | 9611 | 0.11592153519625549 | No Hit |
GTATGAATGGCTCCACGAGGGTTCAGCTGTCTCTTACTTTTA | 9044 | 0.10908275562531834 | No Hit |
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 8810 | 0.10626040215159825 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 9300 | 0.0 | 22.664516 | 1 |
GTATCAA | 21235 | 0.0 | 19.818224 | 1 |
TTAACGG | 2155 | 0.0 | 15.034803 | 35 |
TAACGGC | 2185 | 0.0 | 14.828375 | 36 |
TCTATAC | 1780 | 0.0 | 14.056181 | 3 |
GTATTAG | 4235 | 0.0 | 13.558442 | 1 |
GCCGTTA | 2120 | 0.0 | 13.330189 | 15 |
CCGTTAA | 2120 | 0.0 | 13.330189 | 16 |
TAGGACC | 1770 | 0.0 | 13.118645 | 4 |
AACGCAG | 31840 | 0.0 | 13.070352 | 6 |
ATCAACG | 32035 | 0.0 | 13.013267 | 3 |
TCAACGC | 32465 | 0.0 | 12.813183 | 4 |
CGAACTA | 2070 | 0.0 | 12.782609 | 29 |
CAACGCA | 32800 | 0.0 | 12.69878 | 5 |
CCGAGTT | 900 | 0.0 | 12.6 | 13 |
GCGAACT | 2095 | 0.0 | 12.544153 | 28 |
GGCACCG | 2620 | 0.0 | 12.503817 | 9 |
TATCAAC | 33520 | 0.0 | 12.501194 | 2 |
AGGTCGC | 2045 | 0.0 | 12.498778 | 35 |
ACGCAGA | 33795 | 0.0 | 12.303596 | 7 |