Basic Statistics
Measure | Value |
---|---|
Filename | ERR1041609.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 7794292 |
Sequences flagged as poor quality | 0 |
Sequence length | 43 |
%GC | 49 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 3660 | 0.0 | 23.403006 | 1 |
CTTATAC | 5525 | 0.0 | 16.909502 | 37 |
TCTTATA | 9885 | 0.0 | 16.26353 | 37 |
GTATCAA | 5665 | 0.0 | 14.956753 | 2 |
CTCTTAT | 15435 | 0.0 | 13.687724 | 37 |
GTATTAG | 1630 | 0.0 | 12.2576685 | 1 |
TAATACT | 2175 | 0.0 | 11.908046 | 4 |
TCTCTTA | 23090 | 0.0 | 11.545474 | 37 |
ATCAACG | 7810 | 0.0 | 11.5358515 | 2 |
TCAACGC | 7930 | 0.0 | 11.431273 | 3 |
CAACGCA | 8065 | 0.0 | 11.125233 | 4 |
TATACTG | 1345 | 0.0 | 11.003717 | 5 |
TATCAAC | 8480 | 0.0 | 10.668042 | 1 |
TTAACGG | 590 | 0.0 | 10.661017 | 35 |
TCTAATA | 1420 | 0.0 | 10.552816 | 2 |
TAGACAG | 1165 | 0.0 | 10.480687 | 5 |
AACGCAG | 8745 | 0.0 | 10.450543 | 5 |
ATACCGA | 285 | 1.6714694E-8 | 10.385965 | 6 |
GGGTAAG | 1035 | 0.0 | 10.36715 | 1 |
CTAATAC | 1670 | 0.0 | 10.191617 | 3 |