Basic Statistics
Measure | Value |
---|---|
Filename | ERR1041506.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 22368732 |
Sequences flagged as poor quality | 0 |
Sequence length | 43 |
%GC | 47 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT | 128251 | 0.5733494415329398 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT | 122016 | 0.545475711363523 | No Hit |
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT | 91634 | 0.4096521877055883 | No Hit |
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 53912 | 0.241015002549094 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 49000 | 0.0 | 16.042143 | 1 |
TTAACGG | 1375 | 0.0 | 12.781818 | 35 |
GTATTAG | 4900 | 0.0 | 11.6285715 | 1 |
GTATCAA | 68025 | 0.0 | 11.533774 | 2 |
TATACTG | 3980 | 0.0 | 11.341708 | 5 |
AACGCAG | 73790 | 0.0 | 10.564981 | 5 |
TAATACT | 5455 | 0.0 | 10.140239 | 4 |
GTACTAG | 1610 | 0.0 | 9.996894 | 1 |
AGTACGG | 43400 | 0.0 | 9.936291 | 2 |
GAGTACG | 43740 | 0.0 | 9.935185 | 1 |
TAGACAG | 3505 | 0.0 | 9.817404 | 5 |
TAACGGC | 1810 | 0.0 | 9.709945 | 36 |
CTAATAC | 4775 | 0.0 | 9.685864 | 3 |
TTAGACT | 2590 | 0.0 | 9.5 | 4 |
TCTATAC | 3180 | 0.0 | 9.482704 | 3 |
CTACACT | 4145 | 0.0 | 9.462003 | 4 |
CTAGTAC | 1740 | 0.0 | 9.356322 | 3 |
GTAATAC | 2875 | 0.0 | 9.266088 | 3 |
TCTAGAC | 2105 | 0.0 | 9.228029 | 3 |
ACGCAGA | 85210 | 0.0 | 9.155558 | 6 |