ERR1041500.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1041500.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	11196027
Sequences flagged as poor quality	0
Sequence length	43
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	140065	1.25102413561525	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	126241	1.1275517645679132	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	92848	0.8292941773005726	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	61753	0.5515617281022992	No Hit
AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	21098	0.18844184637997033	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	17817	0.15913680808379616	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	17366	0.15510859343229524	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	16546	0.14778456679320262	No Hit
GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA	16474	0.14714148152733109	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	13417	0.11983715294720172	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AGACGTA	1235	15.578948	25
CGAGACG	1245	15.305221	23
ATCTCGT	1375	14.127274	37
GAGACGT	1400	13.610714	24
GTACTAG	825	13.230302	1
AATCTCG	1485	13.080808	36
GACGTAG	1445	13.058824	26
CGTAGAG	1520	12.779606	28
TTAACGG	640	12.71875	35
ACGTAGA	1510	12.619205	27
TATACTG	1860	12.532258	5
GTATTAG	2120	12.216981	1
CCCACGA	1650	12.10909	19
ACGAGAC	1645	12.033434	22
ATCTCCG	1735	11.942364	10
CTAGTAC	950	11.684211	3
CACGAGA	1760	11.667614	21
TCTCCGA	1910	10.848167	11
TAACGGC	755	10.781457	36
GGTATCA	73500	10.745102	1