Basic Statistics
Measure | Value |
---|---|
Filename | ERR1041461.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 8568019 |
Sequences flagged as poor quality | 0 |
Sequence length | 43 |
%GC | 49 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT | 19430 | 0.2267735400680134 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT | 18352 | 0.2141918686221401 | No Hit |
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT | 13413 | 0.15654727189563888 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 10155 | 0.0 | 15.976858 | 1 |
TATACTG | 1480 | 0.0 | 12.25 | 5 |
TTAACGG | 630 | 0.0 | 12.039683 | 35 |
TAAGACT | 1435 | 0.0 | 11.731708 | 4 |
GTACTAG | 640 | 0.0 | 11.5625 | 1 |
TAATACT | 1705 | 0.0 | 11.501467 | 4 |
TAGACAG | 1660 | 0.0 | 11.144578 | 5 |
GTATCAA | 14555 | 0.0 | 11.096187 | 2 |
ATAATAC | 1125 | 0.0 | 11.017778 | 3 |
CTAGTAC | 675 | 0.0 | 10.962963 | 3 |
CGCGAAA | 240 | 1.8467654E-7 | 10.791667 | 15 |
GTATTAG | 1980 | 0.0 | 10.744949 | 1 |
GTATACG | 425 | 0.0 | 10.447058 | 1 |
TAACGGC | 745 | 0.0 | 10.42953 | 36 |
TAGTACT | 1160 | 0.0 | 10.366379 | 4 |
GCGTAGA | 465 | 0.0 | 10.344086 | 1 |
TATACCG | 415 | 0.0 | 10.253012 | 5 |
TCTATAC | 1125 | 0.0 | 10.195556 | 3 |
TAGGACC | 1295 | 0.0 | 10.142858 | 4 |
CTAATAC | 2070 | 0.0 | 10.099034 | 3 |