Basic Statistics
Measure | Value |
---|---|
Filename | ERR1041455.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 6444430 |
Sequences flagged as poor quality | 0 |
Sequence length | 43 |
%GC | 51 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 3850 | 0.0 | 20.614286 | 1 |
GTATCAA | 5645 | 0.0 | 13.86271 | 2 |
TTAACGG | 375 | 0.0 | 13.813333 | 35 |
TCGTATG | 175 | 5.3160693E-7 | 12.685715 | 37 |
TAACGGC | 415 | 0.0 | 12.481928 | 36 |
TAGGACC | 840 | 0.0 | 11.011905 | 4 |
GTATTAG | 1230 | 0.0 | 10.979674 | 1 |
GTATACG | 240 | 1.846438E-7 | 10.791667 | 1 |
TATACTG | 840 | 0.0 | 10.791666 | 5 |
TTAGACT | 605 | 0.0 | 10.702479 | 4 |
CTAGAAC | 930 | 0.0 | 10.543011 | 3 |
GTTAGAC | 355 | 4.5474735E-11 | 10.422536 | 3 |
GTCGTAC | 340 | 2.2737368E-10 | 10.338236 | 1 |
ATCAACG | 7885 | 0.0 | 10.299937 | 2 |
TCAACGC | 7990 | 0.0 | 10.234042 | 3 |
CAACGCA | 7940 | 0.0 | 10.228589 | 4 |
AACGCAG | 8075 | 0.0 | 10.217957 | 5 |
TAGAACT | 1145 | 0.0 | 10.17904 | 4 |
TACGCTG | 465 | 0.0 | 9.946237 | 5 |
TAATACT | 1285 | 0.0 | 9.933852 | 4 |