Basic Statistics
Measure | Value |
---|---|
Filename | ERR1041445.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 7984227 |
Sequences flagged as poor quality | 0 |
Sequence length | 43 |
%GC | 46 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT | 31985 | 0.40060233758383873 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT | 29723 | 0.3722714797562745 | No Hit |
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT | 22567 | 0.2826447694936529 | No Hit |
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 15052 | 0.18852169408510053 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 10590 | 0.0 | 19.565628 | 1 |
ATCTCGT | 1050 | 0.0 | 15.504763 | 37 |
TTAACGG | 1525 | 0.0 | 13.708197 | 35 |
GTATCAA | 15305 | 0.0 | 13.622672 | 2 |
ATTAGAG | 2055 | 0.0 | 13.323601 | 3 |
CGAGACA | 1240 | 0.0 | 13.278226 | 23 |
TAACGGC | 1610 | 0.0 | 13.09938 | 36 |
CCCACGA | 1275 | 0.0 | 13.058824 | 19 |
ACGAGAC | 1325 | 0.0 | 12.8452835 | 22 |
GTATTAG | 2905 | 0.0 | 12.609295 | 1 |
CTACCCG | 720 | 0.0 | 12.590278 | 10 |
CGAGCCC | 1315 | 0.0 | 12.380228 | 15 |
ATCTCCG | 1305 | 0.0 | 12.333333 | 10 |
TAATACT | 3555 | 0.0 | 12.177215 | 4 |
ACCGCCT | 1930 | 0.0 | 12.173575 | 12 |
AATACTG | 2825 | 0.0 | 12.049558 | 5 |
TATACAC | 1880 | 0.0 | 11.808511 | 3 |
CTAATAC | 3565 | 0.0 | 11.57223 | 3 |
TCTCCGA | 1455 | 0.0 | 11.570447 | 11 |
TCTAATA | 2715 | 0.0 | 11.447514 | 2 |