Basic Statistics
Measure | Value |
---|---|
Filename | ERR1041426.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 8340607 |
Sequences flagged as poor quality | 0 |
Sequence length | 42 |
%GC | 44 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT | 46154 | 0.5533650008926209 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT | 34668 | 0.4156532012598124 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTT | 21733 | 0.26056856533343437 | No Hit |
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 9212 | 0.11044759691950477 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 7135 | 0.0 | 27.876663 | 1 |
GTATCAA | 19060 | 0.0 | 21.437567 | 1 |
ATCAACG | 28335 | 0.0 | 14.191637 | 3 |
TCAACGC | 28440 | 0.0 | 14.101266 | 4 |
GTATTAG | 3810 | 0.0 | 13.984252 | 1 |
TATCAAC | 28960 | 0.0 | 13.9412985 | 2 |
CAACGCA | 28810 | 0.0 | 13.93891 | 5 |
AACGCAG | 29205 | 0.0 | 13.799692 | 6 |
GCGAACT | 1535 | 0.0 | 13.602606 | 28 |
TTAACGG | 1865 | 0.0 | 13.319035 | 35 |
CGAACTA | 1545 | 0.0 | 13.281554 | 29 |
TAACGGC | 1870 | 0.0 | 13.187166 | 36 |
ACGCAGA | 31245 | 0.0 | 12.892943 | 7 |
TAGGACC | 1360 | 0.0 | 12.838236 | 4 |
CGCAGAG | 31625 | 0.0 | 12.738024 | 8 |
CAGAGTA | 33005 | 0.0 | 12.178155 | 10 |
AGAGTAC | 32955 | 0.0 | 12.169322 | 11 |
GCAGAGT | 33025 | 0.0 | 12.1544285 | 9 |
GTATACG | 400 | 0.0 | 12.15 | 1 |
GTATTAA | 1840 | 0.0 | 12.032609 | 1 |