Basic Statistics
Measure | Value |
---|---|
Filename | ERR1041425.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 8577851 |
Sequences flagged as poor quality | 0 |
Sequence length | 42 |
%GC | 44 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT | 55381 | 0.6456279084353412 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT | 40616 | 0.47349854876238817 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTT | 26243 | 0.30593909826598764 | No Hit |
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 11451 | 0.13349497444056793 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 8885 | 0.0 | 24.06753 | 1 |
GTATCAA | 22810 | 0.0 | 21.566856 | 1 |
TAACGGC | 1810 | 0.0 | 15.116022 | 36 |
TTAACGG | 1850 | 0.0 | 14.886487 | 35 |
TATCAAC | 34450 | 0.0 | 14.2066765 | 2 |
ATCAACG | 34865 | 0.0 | 13.965295 | 3 |
AACGCAG | 34830 | 0.0 | 13.963824 | 6 |
TCAACGC | 35115 | 0.0 | 13.850492 | 4 |
CAACGCA | 35550 | 0.0 | 13.675949 | 5 |
GTATTAG | 3665 | 0.0 | 13.407913 | 1 |
ACGCAGA | 37175 | 0.0 | 13.082985 | 7 |
CGCAGAG | 37500 | 0.0 | 12.9696 | 8 |
CCGTTAA | 1685 | 0.0 | 12.818991 | 16 |
AGGTCGC | 1910 | 0.0 | 12.816754 | 35 |
AGAGTAC | 39120 | 0.0 | 12.372699 | 11 |
TTTAACG | 2305 | 0.0 | 12.338395 | 34 |
CAGAGTA | 39280 | 0.0 | 12.331466 | 10 |
GCAGAGT | 39595 | 0.0 | 12.224271 | 9 |
TAGGACC | 1755 | 0.0 | 12.205129 | 4 |
GCCGTTA | 1775 | 0.0 | 12.067605 | 15 |