Basic Statistics
Measure | Value |
---|---|
Filename | ERR1041422.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 7543991 |
Sequences flagged as poor quality | 0 |
Sequence length | 43 |
%GC | 49 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT | 27791 | 0.36838591138298016 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT | 25705 | 0.3407347649274767 | No Hit |
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT | 20135 | 0.2669011667696846 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 7850 | 0.0 | 28.680891 | 1 |
GTATCAA | 13115 | 0.0 | 17.195196 | 2 |
TATACTG | 880 | 0.0 | 11.772727 | 5 |
ATCAACG | 19870 | 0.0 | 11.340212 | 2 |
TATCAAC | 20315 | 0.0 | 11.3194685 | 3 |
TCAACGC | 20065 | 0.0 | 11.266883 | 3 |
TTAACGG | 460 | 0.0 | 11.26087 | 35 |
TAATACT | 1615 | 0.0 | 11.2260065 | 4 |
CAACGCA | 20335 | 0.0 | 11.153676 | 4 |
AACGCAG | 20520 | 0.0 | 11.080166 | 5 |
TAACGGC | 485 | 0.0 | 11.061855 | 36 |
TCTATAC | 895 | 0.0 | 10.748604 | 3 |
GTATAGG | 880 | 0.0 | 10.301136 | 1 |
TTAGACT | 885 | 0.0 | 10.242938 | 4 |
GTATTAG | 1800 | 0.0 | 10.072223 | 1 |
TAGTACT | 900 | 0.0 | 10.072223 | 4 |
AGGACCG | 755 | 0.0 | 10.046358 | 5 |
TTGCGCG | 1280 | 0.0 | 9.972656 | 18 |
ACGCAGA | 22860 | 0.0 | 9.937882 | 6 |
CGATCGC | 975 | 0.0 | 9.866667 | 19 |