ERR1146464_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1146464_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3918711
Sequences flagged as poor quality	0
Sequence length	100
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCCTAGTACTGTGCGCCAATTAGGTCGTCATTGCGCCAGCTCGTCAGCGC	10107	0.2579164424220107	No Hit
ATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTTTTCCAGGA	7405	0.18896519799495293	No Hit
GTACTAGGCATCGTCATCCAATGCGACGAGTCCTACACTATCTTGGATAT	7169	0.18294280951057632	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7160	0.1827131421531213	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6540	0.16689161308399625	No Hit
ATACTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATA	6228	0.15892981135888817	No Hit
CCTATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTC	6194	0.15806217911961357	No Hit
ATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATC	6085	0.1552806522348803	No Hit
CTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATAAAC	5083	0.12971101977155242	No Hit
GTATACGGGCGTCGGCATCCAGACCGTCGGCTGATCGTGGTTTTACTAGG	4050	0.10335031085476831	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4017	0.1025081972107665	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	6770	45.979816	1
GTATCAA	11210	36.99652	1
GTGGTAT	2250	32.601685	1
GTACTAG	2860	30.580519	1
ATCAACG	13255	30.185465	3
CAACGCA	13290	30.165173	5
GGGCACC	3470	29.01043	94
AACGCAG	14750	27.94298	6
TAGGCAT	3725	27.88353	5
TATCAAC	14730	27.865387	2
CTGTGCG	3970	26.994198	9
TCAACGC	15305	26.508934	4
TAGTACT	4150	26.281773	4
GTACATG	13655	24.862421	1
ACGCAGA	16155	24.69823	7
CTAGGCA	4410	24.305862	4
CGCAGAG	16425	24.263311	8
TACATGG	13765	24.148869	2
CTAGTAC	4735	24.128723	3
ACATGGG	13455	23.65664	3