ERR1146454_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1146454_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3606452
Sequences flagged as poor quality	0
Sequence length	100
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	11001	0.30503663988873275	No Hit
GCCTAGTACTGTGCGCCAATTAGGTCGTCATTGCGCCAGCTCGTCAGCGC	9588	0.26585685876312787	No Hit
GTACTAGGCATCGTCATCCAATGCGACGAGTCCTACACTATCTTGGATAT	7802	0.21633450271901583	No Hit
ATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTTTTCCAGGA	6845	0.18979872739190762	No Hit
ATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATC	6300	0.17468692221607277	No Hit
ATACTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATA	6130	0.1699731481245279	No Hit
CCTATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTC	5769	0.15996331020071805	No Hit
CTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATAAAC	5186	0.14379783787500847	No Hit
GTATACGGGCGTCGGCATCCAGACCGTCGGCTGATCGTGGTTTTACTAGG	4113	0.11404560493249322	No Hit
GTGTAGGACTCGTCGCATTGGATGACGATGCCTAGTACTGTGCGCCAATT	3776	0.10470124099807789	No Hit
GTCTTAGCAGTAGTTTATAAGGAATATATCCCATTTTTAGTTATAATGAT	3732	0.10348120535085452	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGGCACC	3455	35.132664	94
GTACTAG	2865	34.75023	1
GTATCAA	6945	33.154877	1
CAACGCA	6570	32.179317	5
TAGTACT	4310	31.286612	4
CTGTGCG	4160	30.808165	9
GGTATCA	4335	30.15022	1
ATCAACG	7005	30.117739	3
TAGGCAT	3740	29.771889	5
CTAGTAC	4695	28.422804	3
TCTAACG	1455	28.096914	2
CTAACGC	1475	28.03334	3
AACGCAG	8035	27.749157	6
GTACTGT	4750	27.66983	6
TATCAAC	8490	27.06472	2
GTACATG	14460	26.920649	1
GCATCGT	3380	26.803701	8
TACTGTG	5190	26.410076	7
GGCGTCG	2280	26.352951	8
CGGGCGT	2195	26.303444	6